Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rfc1P35601 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rfc1P35601 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rfc1P35601 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc1P35601 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.28■□□□□ 0.68
Rfc1P35601 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.28■□□□□ 0.68
Rfc1P35601 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.28■□□□□ 0.68
Rfc1P35601 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rfc1P35601 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc1P35601 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc1P35601 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rfc1P35601 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc1P35601 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc1P35601 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc1P35601 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc1P35601 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.27■□□□□ 0.68
Rfc1P35601 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
Rfc1P35601 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc1P35601 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.27■□□□□ 0.67
Rfc1P35601 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.26■□□□□ 0.67
Rfc1P35601 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rfc1P35601 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Gm9847-201ENSMUST00000052528 599 ntBASIC19.26■□□□□ 0.67
Rfc1P35601 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rfc1P35601 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc1P35601 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rfc1P35601 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.25■□□□□ 0.67
Rfc1P35601 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rfc1P35601 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rfc1P35601 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rfc1P35601 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.25■□□□□ 0.67
Rfc1P35601 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rfc1P35601 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc1P35601 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Rfc1P35601 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Rfc1P35601 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
Rfc1P35601 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Rfc1P35601 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rfc1P35601 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfc1P35601 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc1P35601 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfc1P35601 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rfc1P35601 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rfc1P35601 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.23■□□□□ 0.67
Rfc1P35601 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.23■□□□□ 0.67
Rfc1P35601 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc1P35601 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms