Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.96■□□□□ 0.31
Foxa1P35582 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.96■□□□□ 0.31
Foxa1P35582 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Foxa1P35582 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Foxa1P35582 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxa1P35582 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Foxa1P35582 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Foxa1P35582 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.96■□□□□ 0.3
Foxa1P35582 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Foxa1P35582 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.95■□□□□ 0.3
Foxa1P35582 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Foxa1P35582 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Foxa1P35582 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.95■□□□□ 0.3
Foxa1P35582 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxa1P35582 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Foxa1P35582 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Foxa1P35582 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Foxa1P35582 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Foxa1P35582 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Foxa1P35582 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Foxa1P35582 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxa1P35582 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Foxa1P35582 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Foxa1P35582 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Foxa1P35582 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxa1P35582 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxa1P35582 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Foxa1P35582 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxa1P35582 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Foxa1P35582 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Foxa1P35582 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxa1P35582 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Foxa1P35582 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Foxa1P35582 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Foxa1P35582 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Foxa1P35582 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxa1P35582 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Foxa1P35582 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxa1P35582 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Foxa1P35582 Gm5408-201ENSMUST00000197998 747 ntBASIC16.9■□□□□ 0.3
Foxa1P35582 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Foxa1P35582 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxa1P35582 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxa1P35582 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Foxa1P35582 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Foxa1P35582 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Foxa1P35582 Gm22325-201ENSMUST00000158904 308 ntBASIC16.89■□□□□ 0.29
Foxa1P35582 Gm26524-201ENSMUST00000192339 390 ntBASIC16.89■□□□□ 0.29
Foxa1P35582 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.89■□□□□ 0.29
Foxa1P35582 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Foxa1P35582 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxa1P35582 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms