Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hes1P35428 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.1■□□□□ 0.01
Hes1P35428 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
Hes1P35428 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.1■□□□□ 0.01
Hes1P35428 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hes1P35428 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Hes1P35428 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.1■□□□□ 0.01
Hes1P35428 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.1■□□□□ 0.01
Hes1P35428 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hes1P35428 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.1■□□□□ 0.01
Hes1P35428 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 AV356131-201ENSMUST00000206201 750 ntBASIC15.09■□□□□ 0.01
Hes1P35428 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Hes1P35428 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hes1P35428 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hes1P35428 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Hes1P35428 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hes1P35428 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hes1P35428 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hes1P35428 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.08■□□□□ 0
Hes1P35428 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Hes1P35428 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hes1P35428 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hes1P35428 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hes1P35428 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.07■□□□□ 0
Hes1P35428 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.07■□□□□ 0
Hes1P35428 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.07■□□□□ 0
Hes1P35428 Gm7514-201ENSMUST00000209475 934 ntBASIC15.07■□□□□ 0
Hes1P35428 Gm10033-202ENSMUST00000211874 928 ntBASIC15.07■□□□□ 0
Hes1P35428 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.07■□□□□ 0
Hes1P35428 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hes1P35428 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hes1P35428 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hes1P35428 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hes1P35428 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hes1P35428 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hes1P35428 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.06■□□□□ 0
Hes1P35428 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hes1P35428 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.06■□□□□ 0
Hes1P35428 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.06■□□□□ 0
Hes1P35428 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.06■□□□□ 0
Hes1P35428 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Hes1P35428 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Hes1P35428 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.06■□□□□ 0
Hes1P35428 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hes1P35428 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Hes1P35428 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms