Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd40P27512 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cd40P27512 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cd40P27512 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cd40P27512 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Gm26524-201ENSMUST00000192339 390 ntBASIC16.6■□□□□ 0.25
Cd40P27512 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cd40P27512 Gm10602-201ENSMUST00000098239 609 ntBASIC16.6■□□□□ 0.25
Cd40P27512 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd40P27512 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd40P27512 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.59■□□□□ 0.25
Cd40P27512 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cd40P27512 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cd40P27512 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
Cd40P27512 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd40P27512 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd40P27512 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.58■□□□□ 0.24
Cd40P27512 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cd40P27512 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd40P27512 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Cd40P27512 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd40P27512 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cd40P27512 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.57■□□□□ 0.24
Cd40P27512 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cd40P27512 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd40P27512 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Cd40P27512 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.56■□□□□ 0.24
Cd40P27512 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Cd40P27512 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cd40P27512 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Rab3c-203ENSMUST00000224180 967 ntBASIC16.56■□□□□ 0.24
Cd40P27512 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd40P27512 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Cd40P27512 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Cd40P27512 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.55■□□□□ 0.24
Cd40P27512 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cd40P27512 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.55■□□□□ 0.24
Cd40P27512 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cd40P27512 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.55■□□□□ 0.24
Cd40P27512 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cd40P27512 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cd40P27512 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd40P27512 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.54■□□□□ 0.24
Cd40P27512 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cd40P27512 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms