Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col8a2P25318 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Gm11249-201ENSMUST00000117071 859 ntBASIC15.32■□□□□ 0.04
Col8a2P25318 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col8a2P25318 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col8a2P25318 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Col8a2P25318 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
Col8a2P25318 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col8a2P25318 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Dio3-201ENSMUST00000097228 1449 ntBASIC15.31■□□□□ 0.04
Col8a2P25318 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.31■□□□□ 0.04
Col8a2P25318 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col8a2P25318 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col8a2P25318 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Gm13168-201ENSMUST00000121771 632 ntBASIC15.3■□□□□ 0.04
Col8a2P25318 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Mtag2-201ENSMUST00000058665 714 ntBASIC15.3■□□□□ 0.04
Col8a2P25318 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col8a2P25318 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col8a2P25318 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.3■□□□□ 0.04
Col8a2P25318 Fst-202ENSMUST00000223640 2612 ntBASIC15.3■□□□□ 0.04
Col8a2P25318 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.29■□□□□ 0.04
Col8a2P25318 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col8a2P25318 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Gm2559-201ENSMUST00000201323 363 ntBASIC15.29■□□□□ 0.04
Col8a2P25318 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col8a2P25318 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.29■□□□□ 0.04
Col8a2P25318 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col8a2P25318 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.28■□□□□ 0.04
Col8a2P25318 Gm20760-201ENSMUST00000179197 648 ntBASIC15.28■□□□□ 0.04
Col8a2P25318 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.28■□□□□ 0.04
Col8a2P25318 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col8a2P25318 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col8a2P25318 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col8a2P25318 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.27■□□□□ 0.04
Col8a2P25318 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col8a2P25318 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col8a2P25318 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.27■□□□□ 0.04
Col8a2P25318 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.27■□□□□ 0.04
Col8a2P25318 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.27■□□□□ 0.04
Col8a2P25318 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.27■□□□□ 0.04
Col8a2P25318 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Gm22240-201ENSMUST00000175225 82 ntBASIC15.27■□□□□ 0.04
Col8a2P25318 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col8a2P25318 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms