Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VimP20152 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VimP20152 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.66■□□□□ 0.58
VimP20152 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
VimP20152 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VimP20152 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.65■□□□□ 0.58
VimP20152 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.65■□□□□ 0.58
VimP20152 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
VimP20152 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VimP20152 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VimP20152 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VimP20152 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VimP20152 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
VimP20152 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VimP20152 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
VimP20152 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VimP20152 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.64■□□□□ 0.57
VimP20152 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VimP20152 Gm40881-201ENSMUST00000223397 166 ntBASIC18.64■□□□□ 0.57
VimP20152 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VimP20152 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VimP20152 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VimP20152 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
VimP20152 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VimP20152 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
VimP20152 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Gm10232-201ENSMUST00000089221 720 ntBASIC18.63■□□□□ 0.57
VimP20152 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VimP20152 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.63■□□□□ 0.57
VimP20152 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.62■□□□□ 0.57
VimP20152 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VimP20152 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.62■□□□□ 0.57
VimP20152 Gm13238-201ENSMUST00000117655 780 ntBASIC18.62■□□□□ 0.57
VimP20152 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VimP20152 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.62■□□□□ 0.57
VimP20152 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
VimP20152 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VimP20152 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VimP20152 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.61■□□□□ 0.57
VimP20152 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VimP20152 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VimP20152 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VimP20152 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VimP20152 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VimP20152 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VimP20152 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
VimP20152 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VimP20152 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms