Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc8P09025 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc8P09025 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxc8P09025 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.68■□□□□ 0.74
Hoxc8P09025 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc8P09025 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.68■□□□□ 0.74
Hoxc8P09025 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.67■□□□□ 0.74
Hoxc8P09025 Gm11539-201ENSMUST00000119837 557 ntBASIC19.67■□□□□ 0.74
Hoxc8P09025 Gm13436-201ENSMUST00000120418 567 ntBASIC19.67■□□□□ 0.74
Hoxc8P09025 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.67■□□□□ 0.74
Hoxc8P09025 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc8P09025 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc8P09025 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc8P09025 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc8P09025 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc8P09025 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc8P09025 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxc8P09025 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxc8P09025 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.65■□□□□ 0.74
Hoxc8P09025 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc8P09025 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.74
Hoxc8P09025 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc8P09025 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc8P09025 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc8P09025 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxc8P09025 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hoxc8P09025 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.64■□□□□ 0.73
Hoxc8P09025 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.64■□□□□ 0.73
Hoxc8P09025 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc8P09025 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.63■□□□□ 0.73
Hoxc8P09025 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc8P09025 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc8P09025 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.62■□□□□ 0.73
Hoxc8P09025 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc8P09025 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Hoxc8P09025 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hoxc8P09025 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc8P09025 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc8P09025 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hoxc8P09025 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc8P09025 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms