Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Abcd4O89016 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.54■□□□□ 0.24
Abcd4O89016 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
Abcd4O89016 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.54■□□□□ 0.24
Abcd4O89016 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abcd4O89016 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.53■□□□□ 0.24
Abcd4O89016 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Abcd4O89016 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcd4O89016 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Abcd4O89016 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcd4O89016 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Abcd4O89016 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.52■□□□□ 0.23
Abcd4O89016 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Abcd4O89016 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcd4O89016 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Abcd4O89016 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.51■□□□□ 0.23
Abcd4O89016 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Abcd4O89016 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Gm13168-201ENSMUST00000121771 632 ntBASIC16.51■□□□□ 0.23
Abcd4O89016 Trmt13-210ENSMUST00000198454 880 ntBASIC16.51■□□□□ 0.23
Abcd4O89016 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.51■□□□□ 0.23
Abcd4O89016 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Abcd4O89016 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcd4O89016 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Abcd4O89016 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
Abcd4O89016 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.5■□□□□ 0.23
Abcd4O89016 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abcd4O89016 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.49■□□□□ 0.23
Abcd4O89016 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.49■□□□□ 0.23
Abcd4O89016 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms