Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Syn1O88935 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syn1O88935 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Syn1O88935 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Syn1O88935 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Syn1O88935 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Syn1O88935 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Syn1O88935 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Syn1O88935 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syn1O88935 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.89■□□□□ 0.61
Syn1O88935 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Gm7284-201ENSMUST00000131667 944 ntBASIC18.88■□□□□ 0.61
Syn1O88935 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Syn1O88935 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Syn1O88935 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Syn1O88935 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syn1O88935 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.87■□□□□ 0.61
Syn1O88935 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.87■□□□□ 0.61
Syn1O88935 Gm44771-201ENSMUST00000206975 626 ntBASIC18.87■□□□□ 0.61
Syn1O88935 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.87■□□□□ 0.61
Syn1O88935 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syn1O88935 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.86■□□□□ 0.61
Syn1O88935 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Gm10138-203ENSMUST00000206952 366 ntBASIC18.86■□□□□ 0.61
Syn1O88935 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Syn1O88935 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.86■□□□□ 0.61
Syn1O88935 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syn1O88935 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Syn1O88935 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Syn1O88935 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.85■□□□□ 0.61
Syn1O88935 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Gm37292-201ENSMUST00000192062 758 ntBASIC18.85■□□□□ 0.61
Syn1O88935 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.85■□□□□ 0.61
Syn1O88935 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Syn1O88935 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syn1O88935 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Syn1O88935 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.84■□□□□ 0.61
Syn1O88935 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Gm45058-201ENSMUST00000205810 766 ntBASIC18.84■□□□□ 0.61
Syn1O88935 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.84■□□□□ 0.61
Syn1O88935 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Syn1O88935 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syn1O88935 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Syn1O88935 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.84■□□□□ 0.61
Syn1O88935 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syn1O88935 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Syn1O88935 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Syn1O88935 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syn1O88935 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syn1O88935 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Syn1O88935 Gm5867-201ENSMUST00000063197 592 ntBASIC18.83■□□□□ 0.6
Syn1O88935 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syn1O88935 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms