Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.36■□□□□ 0.21
Hdac3O88895 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.36■□□□□ 0.21
Hdac3O88895 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.36■□□□□ 0.21
Hdac3O88895 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.36■□□□□ 0.21
Hdac3O88895 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.36■□□□□ 0.21
Hdac3O88895 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.36■□□□□ 0.21
Hdac3O88895 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hdac3O88895 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.35■□□□□ 0.21
Hdac3O88895 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Gm9988-201ENSMUST00000069786 435 ntBASIC16.35■□□□□ 0.21
Hdac3O88895 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.35■□□□□ 0.21
Hdac3O88895 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hdac3O88895 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.34■□□□□ 0.21
Hdac3O88895 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.34■□□□□ 0.21
Hdac3O88895 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.34■□□□□ 0.21
Hdac3O88895 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.34■□□□□ 0.21
Hdac3O88895 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.34■□□□□ 0.21
Hdac3O88895 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hdac3O88895 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.34■□□□□ 0.21
Hdac3O88895 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hdac3O88895 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hdac3O88895 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hdac3O88895 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac3O88895 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Hdac3O88895 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac3O88895 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac3O88895 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Hdac3O88895 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.33■□□□□ 0.21
Hdac3O88895 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac3O88895 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac3O88895 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Gm13146-201ENSMUST00000118508 780 ntBASIC16.33■□□□□ 0.2
Hdac3O88895 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
Hdac3O88895 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.33■□□□□ 0.2
Hdac3O88895 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Hdac3O88895 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac3O88895 Gm13234-201ENSMUST00000120010 747 ntBASIC16.32■□□□□ 0.2
Hdac3O88895 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.32■□□□□ 0.2
Hdac3O88895 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.32■□□□□ 0.2
Hdac3O88895 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.32■□□□□ 0.2
Hdac3O88895 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac3O88895 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.32■□□□□ 0.2
Hdac3O88895 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.31■□□□□ 0.2
Hdac3O88895 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hdac3O88895 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Gm42778-201ENSMUST00000199644 553 ntBASIC16.31■□□□□ 0.2
Hdac3O88895 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.31■□□□□ 0.2
Hdac3O88895 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms