Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IkbkbO88351 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.25■□□□□ 0.83
IkbkbO88351 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
IkbkbO88351 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
IkbkbO88351 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IkbkbO88351 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IkbkbO88351 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IkbkbO88351 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Gm6211-202ENSMUST00000167849 925 ntBASIC20.23■□□□□ 0.83
IkbkbO88351 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.23■□□□□ 0.83
IkbkbO88351 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.23■□□□□ 0.83
IkbkbO88351 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.23■□□□□ 0.83
IkbkbO88351 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IkbkbO88351 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.22■□□□□ 0.83
IkbkbO88351 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
IkbkbO88351 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.22■□□□□ 0.83
IkbkbO88351 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.22■□□□□ 0.83
IkbkbO88351 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IkbkbO88351 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
IkbkbO88351 Gm27011-201ENSMUST00000182352 972 ntBASIC20.21■□□□□ 0.83
IkbkbO88351 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.21■□□□□ 0.83
IkbkbO88351 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.21■□□□□ 0.83
IkbkbO88351 Gm4968-201ENSMUST00000071458 858 ntBASIC20.21■□□□□ 0.83
IkbkbO88351 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IkbkbO88351 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Gm12441-201ENSMUST00000121806 588 ntBASIC20.2■□□□□ 0.82
IkbkbO88351 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.2■□□□□ 0.82
IkbkbO88351 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IkbkbO88351 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IkbkbO88351 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.2■□□□□ 0.82
IkbkbO88351 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.2■□□□□ 0.82
IkbkbO88351 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
IkbkbO88351 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
IkbkbO88351 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.2■□□□□ 0.82
IkbkbO88351 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IkbkbO88351 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
IkbkbO88351 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IkbkbO88351 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
IkbkbO88351 Gm5408-201ENSMUST00000197998 747 ntBASIC20.19■□□□□ 0.82
IkbkbO88351 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IkbkbO88351 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.19■□□□□ 0.82
IkbkbO88351 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.19■□□□□ 0.82
IkbkbO88351 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IkbkbO88351 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
IkbkbO88351 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms