Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SgceO70258 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.37■□□□□ 0.21
SgceO70258 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SgceO70258 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.37■□□□□ 0.21
SgceO70258 Gm18671-201ENSMUST00000214826 683 ntBASIC16.37■□□□□ 0.21
SgceO70258 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SgceO70258 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.37■□□□□ 0.21
SgceO70258 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SgceO70258 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgceO70258 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SgceO70258 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SgceO70258 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.36■□□□□ 0.21
SgceO70258 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.36■□□□□ 0.21
SgceO70258 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
SgceO70258 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.36■□□□□ 0.21
SgceO70258 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgceO70258 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SgceO70258 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Gm42642-201ENSMUST00000200683 355 ntBASIC16.35■□□□□ 0.21
SgceO70258 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SgceO70258 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgceO70258 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.35■□□□□ 0.21
SgceO70258 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.35■□□□□ 0.21
SgceO70258 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.34■□□□□ 0.21
SgceO70258 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.34■□□□□ 0.21
SgceO70258 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.34■□□□□ 0.21
SgceO70258 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgceO70258 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SgceO70258 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgceO70258 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgceO70258 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SgceO70258 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgceO70258 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.33■□□□□ 0.2
SgceO70258 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.33■□□□□ 0.2
SgceO70258 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Gm10033-202ENSMUST00000211874 928 ntBASIC16.33■□□□□ 0.2
SgceO70258 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.33■□□□□ 0.2
SgceO70258 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SgceO70258 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SgceO70258 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
SgceO70258 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SgceO70258 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgceO70258 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SgceO70258 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SgceO70258 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
SgceO70258 Gm18284-201ENSMUST00000172604 624 ntBASIC16.32■□□□□ 0.2
SgceO70258 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
SgceO70258 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.32■□□□□ 0.2
SgceO70258 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms