Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.39■□□□□ 0.69
Pja1O55176 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Pja1O55176 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pja1O55176 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pja1O55176 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.39■□□□□ 0.69
Pja1O55176 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pja1O55176 Gm13146-201ENSMUST00000118508 780 ntBASIC19.38■□□□□ 0.69
Pja1O55176 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.38■□□□□ 0.69
Pja1O55176 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pja1O55176 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.38■□□□□ 0.69
Pja1O55176 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pja1O55176 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pja1O55176 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pja1O55176 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pja1O55176 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pja1O55176 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pja1O55176 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.37■□□□□ 0.69
Pja1O55176 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pja1O55176 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pja1O55176 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.36■□□□□ 0.69
Pja1O55176 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pja1O55176 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pja1O55176 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pja1O55176 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.35■□□□□ 0.69
Pja1O55176 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pja1O55176 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.35■□□□□ 0.69
Pja1O55176 Gm43060-201ENSMUST00000200621 289 ntBASIC19.35■□□□□ 0.69
Pja1O55176 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pja1O55176 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.35■□□□□ 0.69
Pja1O55176 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.34■□□□□ 0.69
Pja1O55176 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pja1O55176 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pja1O55176 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pja1O55176 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pja1O55176 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pja1O55176 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pja1O55176 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Pja1O55176 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pja1O55176 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pja1O55176 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Pja1O55176 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.33■□□□□ 0.68
Pja1O55176 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.33■□□□□ 0.68
Pja1O55176 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.33■□□□□ 0.68
Pja1O55176 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.32■□□□□ 0.68
Pja1O55176 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.32■□□□□ 0.68
Pja1O55176 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Gm13534-201ENSMUST00000121169 513 ntBASIC19.32■□□□□ 0.68
Pja1O55176 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Pja1O55176 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pja1O55176 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.32■□□□□ 0.68
Pja1O55176 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pja1O55176 Tgds-204ENSMUST00000228543 1594 ntBASIC19.32■□□□□ 0.68
Pja1O55176 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pja1O55176 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms