Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.18■□□□□ 0.02
SncaO55042 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SncaO55042 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SncaO55042 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SncaO55042 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SncaO55042 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Gm43173-201ENSMUST00000202246 593 ntBASIC15.17■□□□□ 0.02
SncaO55042 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.17■□□□□ 0.02
SncaO55042 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SncaO55042 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.17■□□□□ 0.02
SncaO55042 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SncaO55042 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SncaO55042 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.16■□□□□ 0.02
SncaO55042 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SncaO55042 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.16■□□□□ 0.02
SncaO55042 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SncaO55042 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.16■□□□□ 0.02
SncaO55042 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SncaO55042 Grk6-206ENSMUST00000224995 2971 ntBASIC15.15■□□□□ 0.02
SncaO55042 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.15■□□□□ 0.02
SncaO55042 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.15■□□□□ 0.02
SncaO55042 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SncaO55042 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
SncaO55042 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SncaO55042 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SncaO55042 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.14■□□□□ 0.01
SncaO55042 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SncaO55042 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.14■□□□□ 0.01
SncaO55042 Gm26833-201ENSMUST00000180899 440 ntBASIC15.14■□□□□ 0.01
SncaO55042 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.14■□□□□ 0.01
SncaO55042 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SncaO55042 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SncaO55042 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.14■□□□□ 0.01
SncaO55042 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SncaO55042 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SncaO55042 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.13■□□□□ 0.01
SncaO55042 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms