Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gm13168-201ENSMUST00000121771 632 ntBASIC16.3■□□□□ 0.2
Sh2b3O09039 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sh2b3O09039 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.3■□□□□ 0.2
Sh2b3O09039 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.3■□□□□ 0.2
Sh2b3O09039 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2b3O09039 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Sh2b3O09039 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2b3O09039 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sh2b3O09039 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2b3O09039 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.29■□□□□ 0.2
Sh2b3O09039 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.29■□□□□ 0.2
Sh2b3O09039 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh2b3O09039 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh2b3O09039 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh2b3O09039 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2b3O09039 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.28■□□□□ 0.2
Sh2b3O09039 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sh2b3O09039 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.28■□□□□ 0.2
Sh2b3O09039 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.28■□□□□ 0.2
Sh2b3O09039 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.28■□□□□ 0.2
Sh2b3O09039 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2b3O09039 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh2b3O09039 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Sh2b3O09039 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh2b3O09039 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh2b3O09039 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2b3O09039 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Sh2b3O09039 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.27■□□□□ 0.19
Sh2b3O09039 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.27■□□□□ 0.19
Sh2b3O09039 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2b3O09039 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh2b3O09039 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.26■□□□□ 0.19
Sh2b3O09039 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.26■□□□□ 0.19
Sh2b3O09039 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.26■□□□□ 0.19
Sh2b3O09039 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sh2b3O09039 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sh2b3O09039 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sh2b3O09039 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.26■□□□□ 0.19
Sh2b3O09039 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2b3O09039 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms