Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.96■□□□□ 0.79
Trim30cD3YVI9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim30cD3YVI9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim30cD3YVI9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.93■□□□□ 0.78
Trim30cD3YVI9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 AV356131-201ENSMUST00000206201 750 ntBASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim30cD3YVI9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim30cD3YVI9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.9■□□□□ 0.78
Trim30cD3YVI9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30cD3YVI9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms