Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssxa1B1AUS7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssxa1B1AUS7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ssxa1B1AUS7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ssxa1B1AUS7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.49■□□□□ 0.39
Ssxa1B1AUS7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ssxa1B1AUS7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssxa1B1AUS7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssxa1B1AUS7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssxa1B1AUS7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ssxa1B1AUS7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms