Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv1-88A0A140T8N1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv1-88A0A140T8N1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv1-88A0A140T8N1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Igkv1-88A0A140T8N1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv1-88A0A140T8N1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms