Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13234-201ENSMUST00000120010 747 ntBASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms