Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-4A0A0G2JG01 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-4A0A0G2JG01 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13n-4A0A0G2JG01 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13n-4A0A0G2JG01 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-4A0A0G2JG01 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm12441-201ENSMUST00000121806 588 ntBASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13n-4A0A0G2JG01 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-4A0A0G2JG01 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Nespas-201ENSMUST00000143738 1083 ntBASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms