Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav9-4A0A0B4J1K2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Trav9-4A0A0B4J1K2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav9-4A0A0B4J1K2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Trav9-4A0A0B4J1K2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9-4A0A0B4J1K2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Mir5133-201ENSMUST00000174955 77 ntBASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9-4A0A0B4J1K2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms