Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.77■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.76■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gm10812-201ENSMUST00000099864 546 ntBASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.73■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv5-43A0A0B4J1J2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv5-43A0A0B4J1J2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms