Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-5A0A075B6B9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Tgds-204ENSMUST00000228543 1594 ntBASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-5A0A075B6B9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-5A0A075B6B9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm9959-201ENSMUST00000068277 390 ntBASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-5A0A075B6B9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-5A0A075B6B9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-5A0A075B6B9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms