Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 AV356131-201ENSMUST00000206201 750 ntBASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav6d-7A0A075B6B0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm26571-201ENSMUST00000181399 666 ntBASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-7A0A075B6B0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-7A0A075B6B0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms