Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Trav9d-1A0A075B699 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Gm43060-201ENSMUST00000200621 289 ntBASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9d-1A0A075B699 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav9d-1A0A075B699 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav9d-1A0A075B699 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-1A0A075B699 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms