Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-4A0A075B654 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-4A0A075B654 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-4A0A075B654 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms