Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav5-4A0A075B652 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav5-4A0A075B652 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-4A0A075B652 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav5-4A0A075B652 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav5-4A0A075B652 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms