Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-2A0A075B649 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-2A0A075B649 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-2A0A075B649 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Trav13-2A0A075B649 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Gm14117-201ENSMUST00000122417 843 ntBASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trav13-2A0A075B649 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-2A0A075B649 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.29□□□□□ -0.44
Trav13-2A0A075B649 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms