Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 AA386476-201ENSMUST00000098781 1665 ntBASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8-1A0A075B641 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8-1A0A075B641 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8-1A0A075B641 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav8-1A0A075B641 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8-1A0A075B641 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms