Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Gm43566-201ENSMUST00000196851 808 ntBASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Gm13238-201ENSMUST00000117655 780 ntBASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Gm8969-201ENSMUST00000199694 526 ntBASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7n-4A0A075B620 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7n-4A0A075B620 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav7n-4A0A075B620 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms