Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav4n-4A0A075B615 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4n-4A0A075B615 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4n-4A0A075B615 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4n-4A0A075B615 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms