Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.65□□□□□ -0.22
Trav6-6A0A075B603 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Spcs1-204ENSMUST00000226782 949 ntBASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-6A0A075B603 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-6A0A075B603 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Gm43137-201ENSMUST00000198052 594 ntBASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Gm13241-201ENSMUST00000094493 780 ntBASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-6A0A075B603 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.61□□□□□ -0.23
Trav6-6A0A075B603 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms