Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv1-55A0A075B5W6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm7291-201ENSMUST00000199147 382 ntBASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv1-55A0A075B5W6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv1-55A0A075B5W6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Ighv1-55A0A075B5W6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ighv1-55A0A075B5W6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm7290-201ENSMUST00000104990 617 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm12918-201ENSMUST00000120234 636 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm15710-201ENSMUST00000121821 636 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm5075-201ENSMUST00000196916 622 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-55A0A075B5W6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-55A0A075B5W6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-55A0A075B5W6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms