Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm44896-201ENSMUST00000206190 772 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm22684-201ENSMUST00000082849 132 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Scrt1Q99M85 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.22□□□□□ -1.41
Scrt1Q99M85 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.21□□□□□ -1.41
Scrt1Q99M85 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.21□□□□□ -1.41
Scrt1Q99M85 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.21□□□□□ -1.41
Scrt1Q99M85 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
Scrt1Q99M85 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.21□□□□□ -1.41
Scrt1Q99M85 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm15913-201ENSMUST00000118492 331 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm6382-201ENSMUST00000118873 942 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm16056-201ENSMUST00000119293 135 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm11320-201ENSMUST00000119434 463 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm12140-201ENSMUST00000121214 544 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Mir1953-201ENSMUST00000157866 89 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm38574-201ENSMUST00000211855 640 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Olfr683-201ENSMUST00000061284 960 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scrt1Q99M85 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms