Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 AC147639.2-202ENSMUST00000224834 1545 ntBASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Pcdhb3Q91XZ7 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 AC121997.2-201ENSMUST00000228095 2294 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Mir669i-201ENSMUST00000117007 127 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm9126-201ENSMUST00000117072 416 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm13542-201ENSMUST00000118484 637 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm10224-201ENSMUST00000119496 615 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm13743-201ENSMUST00000121486 724 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm15111-201ENSMUST00000122142 878 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 D730003I15Rik-201ENSMUST00000139056 716 ntTSL 2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm16274-201ENSMUST00000139251 592 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm7316-201ENSMUST00000165395 445 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm26455-201ENSMUST00000175300 92 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm2077-201ENSMUST00000195017 319 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Zim2-202ENSMUST00000203572 1158 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm9367-201ENSMUST00000205703 546 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm45400-201ENSMUST00000211603 653 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm8264-201ENSMUST00000217801 465 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm8768-201ENSMUST00000220020 826 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm24145-201ENSMUST00000082631 163 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Zfp640-202ENSMUST00000224116 1562 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gca-201ENSMUST00000028257 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Pcdhb3Q91XZ7 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms