Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 AC103672.2-201ENSMUST00000228146 1687 ntBASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.28□□□□□ -0.92
Rab11fip3Q8CHD8 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Rab11fip3Q8CHD8 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm6142-201ENSMUST00000120290 325 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm24228-201ENSMUST00000158829 129 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm2058-201ENSMUST00000178791 560 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm2975-201ENSMUST00000209710 820 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 AC157572.1-201ENSMUST00000227187 825 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm24451-201ENSMUST00000083353 133 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37206-201ENSMUST00000195512 3069 ntBASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rab11fip3Q8CHD8 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37984-201ENSMUST00000191641 3733 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 n-R5s172-201ENSMUST00000104508 114 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm15421-202ENSMUST00000118224 399 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 BC064078-201ENSMUST00000122939 570 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Mir1929-201ENSMUST00000158635 93 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm2619-202ENSMUST00000166777 651 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm25617-201ENSMUST00000179548 133 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm27360-201ENSMUST00000183487 80 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm43546-201ENSMUST00000196721 943 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm25617-202ENSMUST00000198387 132 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm42713-201ENSMUST00000202709 945 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm3549-201ENSMUST00000203873 794 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm45136-201ENSMUST00000205793 943 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 AC122459.3-201ENSMUST00000228508 1042 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm16020-201ENSMUST00000084281 210 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms