Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Pde6aP27664 Gm8245-201ENSMUST00000182434 987 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Mir6241-201ENSMUST00000184225 103 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.21□□□□□ -1.1
Pde6aP27664 Gm30517-201ENSMUST00000197350 772 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Gm43928-201ENSMUST00000203737 409 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.21□□□□□ -1.1
Pde6aP27664 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pde6aP27664 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Pde6aP27664 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.21□□□□□ -1.1
Pde6aP27664 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pde6aP27664 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm22774-201ENSMUST00000102084 109 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm14791-201ENSMUST00000119061 1166 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3760-201ENSMUST00000167475 804 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm25640-201ENSMUST00000175378 125 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm18330-201ENSMUST00000199246 547 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm3511-201ENSMUST00000199823 204 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Gm44565-201ENSMUST00000208194 269 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm19540-201ENSMUST00000221843 810 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pde6aP27664 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pde6aP27664 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
Pde6aP27664 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pde6aP27664 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm42535-201ENSMUST00000197312 1399 ntBASIC8.2□□□□□ -1.1
Pde6aP27664 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Pde6aP27664 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pde6aP27664 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Pde6aP27664 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm37082-201ENSMUST00000192629 1927 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm26419-201ENSMUST00000104272 133 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm15530-201ENSMUST00000122206 555 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.19□□□□□ -1.1
Pde6aP27664 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.19□□□□□ -1.1
Pde6aP27664 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm29161-201ENSMUST00000188250 699 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm9114-201ENSMUST00000188558 997 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm2860-201ENSMUST00000199226 707 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.19□□□□□ -1.1
Pde6aP27664 Gm44712-201ENSMUST00000206250 1076 ntBASIC8.19□□□□□ -1.1
Pde6aP27664 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms