Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm43613-201ENSMUST00000199409 1613 ntBASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm7203-201ENSMUST00000210880 1404 ntBASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdhb7Q8CDY9 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm2348-201ENSMUST00000108782 300 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12814-201ENSMUST00000117091 846 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm14981-201ENSMUST00000117325 943 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm4919-201ENSMUST00000117825 604 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm6275-201ENSMUST00000118971 1122 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm14939-201ENSMUST00000120347 680 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm3835-201ENSMUST00000120752 403 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12006-201ENSMUST00000120786 403 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Snrpert-201ENSMUST00000121967 279 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm24517-201ENSMUST00000122560 107 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm22484-201ENSMUST00000157992 306 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm17053-201ENSMUST00000163501 495 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm24369-201ENSMUST00000175387 96 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11392-201ENSMUST00000181419 710 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm5974-201ENSMUST00000181607 986 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm27044-201ENSMUST00000183033 796 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8676-201ENSMUST00000184206 637 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm28724-201ENSMUST00000186149 625 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm28871-201ENSMUST00000186191 687 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm32102-201ENSMUST00000196885 241 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Pdlim5-209ENSMUST00000196908 1196 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm42850-201ENSMUST00000202094 201 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 AC151843.1-201ENSMUST00000215960 691 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm5654-201ENSMUST00000217787 475 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm5789-201ENSMUST00000222643 865 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm25404-201ENSMUST00000082970 107 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 AC154227.2-201ENSMUST00000228677 2101 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms