Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm15621-201ENSMUST00000119162 364 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm20615-201ENSMUST00000177503 705 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm27972-201ENSMUST00000184720 137 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Mir7028-201ENSMUST00000185016 64 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm35323-201ENSMUST00000191836 499 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm24695-201ENSMUST00000083877 83 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm43336-201ENSMUST00000200487 4504 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm14805-201ENSMUST00000120172 340 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm12307-201ENSMUST00000120581 590 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm12630-201ENSMUST00000121575 784 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Calr-ps-201ENSMUST00000121776 485 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm25363-201ENSMUST00000158850 245 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm18199-201ENSMUST00000173820 835 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm18191-201ENSMUST00000174624 824 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm25675-201ENSMUST00000174979 118 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Ighv1-44-201ENSMUST00000195597 352 ntBASIC8.6□□□□□ -1.03
Shank3Q4ACU6 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Shank3Q4ACU6 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Gm19212-201ENSMUST00000216642 862 ntBASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Shank3Q4ACU6 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Shank3Q4ACU6 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.59□□□□□ -1.04
Shank3Q4ACU6 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.59□□□□□ -1.04
Shank3Q4ACU6 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Shank3Q4ACU6 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms