Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Gm28653-201ENSMUST00000185494 5276 ntBASIC11.43□□□□□ -0.58
Rtn4Q99P72 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Numb-207ENSMUST00000129335 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Gm44669-201ENSMUST00000207774 1969 ntBASIC11.43□□□□□ -0.58
Rtn4Q99P72 AC101875.1-201ENSMUST00000222666 2223 ntBASIC11.43□□□□□ -0.58
Rtn4Q99P72 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Gm13854-201ENSMUST00000121183 1679 ntBASIC11.43□□□□□ -0.58
Rtn4Q99P72 Wdr20rt-203ENSMUST00000221980 1667 ntTSL 5 BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Lrrc74a-201ENSMUST00000095527 1935 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rtn4Q99P72 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Ugt1a6a-202ENSMUST00000113134 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm11514-201ENSMUST00000117670 432 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm9434-201ENSMUST00000118975 813 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm6587-201ENSMUST00000120219 613 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm23780-201ENSMUST00000157937 275 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm17748-201ENSMUST00000177906 522 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm26959-201ENSMUST00000182376 978 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm6070-201ENSMUST00000207275 419 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm18455-201ENSMUST00000208768 459 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm18644-201ENSMUST00000211458 815 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm4800-201ENSMUST00000215776 1266 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm19219-201ENSMUST00000215863 724 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm35412-201ENSMUST00000220437 999 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm18243-201ENSMUST00000220756 887 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 CT025535.1-202ENSMUST00000228291 241 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Krtap10-4-201ENSMUST00000092369 981 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Slco4a1-201ENSMUST00000038225 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm5315-201ENSMUST00000204430 1897 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm43225-201ENSMUST00000201381 1439 ntBASIC11.42□□□□□ -0.58
Rtn4Q99P72 Sept2-214ENSMUST00000172165 3192 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Morc3-202ENSMUST00000201097 2918 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC11.42□□□□□ -0.58
Rtn4Q99P72 AC156025.3-201ENSMUST00000225919 3095 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm10797-201ENSMUST00000099661 2222 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 AC164437.4-202ENSMUST00000228794 2413 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Fam13a-202ENSMUST00000173193 1998 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm43775-201ENSMUST00000201019 3395 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm18880-201ENSMUST00000223333 1541 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 AC142266.1-202ENSMUST00000227784 3733 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm9436-201ENSMUST00000120949 1855 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm22369-201ENSMUST00000102415 104 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Igkv3-3-201ENSMUST00000103402 359 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Igkv3-1-201ENSMUST00000103404 359 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm7331-201ENSMUST00000118642 387 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm11765-201ENSMUST00000121173 1205 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm11344-201ENSMUST00000122011 335 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm25185-201ENSMUST00000157754 96 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Uba52-208ENSMUST00000165126 387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm29552-201ENSMUST00000190548 660 ntBASIC11.41□□□□□ -0.58
Rtn4Q99P72 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rtn4Q99P72 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC11.41□□□□□ -0.58
Rtn4Q99P72 Gm36976-201ENSMUST00000192632 1110 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms