Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm23392-201ENSMUST00000157580 113 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Gm26183-201ENSMUST00000157685 139 ntBASIC6.08□□□□□ -1.44
Upk2P38575 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.08□□□□□ -1.44
Upk2P38575 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.08□□□□□ -1.44
Upk2P38575 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.08□□□□□ -1.44
Upk2P38575 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.08□□□□□ -1.44
Upk2P38575 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk2P38575 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk2P38575 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm7731-201ENSMUST00000091759 470 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk2P38575 AC154482.1-201ENSMUST00000223248 2483 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk2P38575 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Upk2P38575 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.08□□□□□ -1.44
Upk2P38575 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.08□□□□□ -1.44
Upk2P38575 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.08□□□□□ -1.44
Upk2P38575 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk2P38575 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Upk2P38575 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm25546-201ENSMUST00000103977 132 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm25311-201ENSMUST00000104136 132 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm12635-201ENSMUST00000117285 752 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm13221-201ENSMUST00000121712 430 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm17022-201ENSMUST00000166415 922 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm22132-201ENSMUST00000175316 100 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm24756-201ENSMUST00000177002 96 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm18848-201ENSMUST00000182069 792 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm18875-201ENSMUST00000188563 882 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.07□□□□□ -1.44
Upk2P38575 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm6077-201ENSMUST00000196008 499 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.07□□□□□ -1.44
Upk2P38575 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.07□□□□□ -1.44
Upk2P38575 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.07□□□□□ -1.44
Upk2P38575 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Upk2P38575 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Upk2P38575 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upk2P38575 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm45354-201ENSMUST00000199820 2557 ntBASIC6.07□□□□□ -1.44
Upk2P38575 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upk2P38575 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Upk2P38575 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms