Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm28060-201ENSMUST00000191554 189 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm37433-201ENSMUST00000192695 678 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm8407-201ENSMUST00000192719 427 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm37441-201ENSMUST00000194430 678 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Trav22-201ENSMUST00000198117 346 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm42883-201ENSMUST00000202594 222 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm18765-201ENSMUST00000203166 660 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm6581-201ENSMUST00000214545 260 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm9267-201ENSMUST00000222831 404 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC6.54□□□□□ -1.36
Col8a1Q00780 BC023105-201ENSMUST00000073997 1227 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.54□□□□□ -1.36
Col8a1Q00780 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm24340-201ENSMUST00000104208 97 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm11880-201ENSMUST00000117612 399 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm12653-201ENSMUST00000117778 561 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm13525-201ENSMUST00000120607 478 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm15077-201ENSMUST00000122344 362 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm5698-201ENSMUST00000178317 724 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm27373-201ENSMUST00000184017 184 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm29145-201ENSMUST00000189914 456 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm20819-201ENSMUST00000191091 925 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.53□□□□□ -1.36
Col8a1Q00780 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm43005-201ENSMUST00000199015 648 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm27680-202ENSMUST00000199221 807 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm2926-201ENSMUST00000205625 239 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm44902-201ENSMUST00000206177 805 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm18193-201ENSMUST00000210017 772 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms