Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col1a1P11087 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm11271-201ENSMUST00000116054 440 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm15750-201ENSMUST00000120970 616 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm25219-201ENSMUST00000157545 330 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm8837-201ENSMUST00000161037 1107 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm7266-201ENSMUST00000187999 405 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm4083-201ENSMUST00000207158 451 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Gm5055-201ENSMUST00000215697 581 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.24□□□□□ -1.09
Col1a1P11087 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col1a1P11087 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col1a1P11087 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col1a1P11087 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Col1a1P11087 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Gm13983-201ENSMUST00000118018 865 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm11902-201ENSMUST00000118849 270 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.23□□□□□ -1.09
Col1a1P11087 Gm17044-201ENSMUST00000168549 828 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 n-R5s209-201ENSMUST00000179494 119 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm43867-201ENSMUST00000203860 525 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 AC153557.1-201ENSMUST00000217697 403 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.23□□□□□ -1.09
Col1a1P11087 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Gm21731-201ENSMUST00000079524 489 ntBASIC8.23□□□□□ -1.09
Col1a1P11087 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col1a1P11087 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.22□□□□□ -1.09
Col1a1P11087 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm24473-201ENSMUST00000104483 131 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm8250-201ENSMUST00000117398 774 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm16057-201ENSMUST00000120811 759 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm12438-201ENSMUST00000122034 336 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm25178-201ENSMUST00000122633 325 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm24687-201ENSMUST00000157758 241 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm5456-201ENSMUST00000170706 844 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Mir5110-201ENSMUST00000175537 87 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Gm17045-201ENSMUST00000178600 844 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Mir6973b-201ENSMUST00000184185 80 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms