Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm11504-201ENSMUST00000120211 173 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm16531-201ENSMUST00000180658 967 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm37978-201ENSMUST00000194736 2915 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm27875-201ENSMUST00000184425 123 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm18705-201ENSMUST00000215985 913 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 AC124103.1-201ENSMUST00000227564 1027 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm42576-201ENSMUST00000202336 2846 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm11852-201ENSMUST00000120806 222 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm19185-201ENSMUST00000196365 643 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Mir375-201ENSMUST00000083682 64 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms