Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Hoxa9P09631 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hoxa9P09631 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Hoxa9P09631 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.21□□□□□ -1.25
Hoxa9P09631 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Hoxa9P09631 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Hoxa9P09631 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.21□□□□□ -1.25
Hoxa9P09631 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hoxa9P09631 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Hoxa9P09631 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hoxa9P09631 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm12653-201ENSMUST00000117778 561 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm23657-201ENSMUST00000122623 294 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm10913-201ENSMUST00000133732 463 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm22262-201ENSMUST00000158713 86 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm16026-205ENSMUST00000162923 641 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm27360-201ENSMUST00000183487 80 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm28952-201ENSMUST00000189285 681 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.21□□□□□ -1.26
Hoxa9P09631 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm44856-201ENSMUST00000206639 304 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
Hoxa9P09631 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.21□□□□□ -1.26
Hoxa9P09631 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.21□□□□□ -1.26
Hoxa9P09631 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hoxa9P09631 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Hoxa9P09631 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm12740-201ENSMUST00000118794 308 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm11343-201ENSMUST00000120579 599 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29048-201ENSMUST00000185342 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29403-201ENSMUST00000185491 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28234-201ENSMUST00000185657 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28248-201ENSMUST00000186093 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29633-202ENSMUST00000186217 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28829-201ENSMUST00000186231 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28261-201ENSMUST00000186417 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28815-201ENSMUST00000186751 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28608-201ENSMUST00000186860 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28122-201ENSMUST00000187088 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28420-201ENSMUST00000187340 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28106-201ENSMUST00000187640 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28698-201ENSMUST00000187734 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29224-201ENSMUST00000187965 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29189-201ENSMUST00000188018 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29476-201ENSMUST00000188397 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29505-201ENSMUST00000188424 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28125-201ENSMUST00000188470 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29391-201ENSMUST00000188545 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29280-201ENSMUST00000188571 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28349-201ENSMUST00000188590 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29652-201ENSMUST00000188622 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28801-201ENSMUST00000188761 449 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28819-206ENSMUST00000188816 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29079-201ENSMUST00000188875 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28213-201ENSMUST00000189183 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29382-201ENSMUST00000189549 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29377-205ENSMUST00000189603 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28327-201ENSMUST00000189638 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28790-201ENSMUST00000189642 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm28907-201ENSMUST00000189700 615 ntBASIC7.2□□□□□ -1.26
Hoxa9P09631 Gm29586-207ENSMUST00000189745 615 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms