Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Gm7831-201ENSMUST00000117990 552 ntBASIC5.12□□□□□ -1.59
TcraP01849 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC5.12□□□□□ -1.59
TcraP01849 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm16523-201ENSMUST00000121253 592 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
TcraP01849 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm25721-201ENSMUST00000157496 171 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm22949-201ENSMUST00000158562 105 ntBASIC5.12□□□□□ -1.59
TcraP01849 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Gm10012-202ENSMUST00000170379 372 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm8307-201ENSMUST00000187682 1150 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm17970-201ENSMUST00000192199 685 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.12□□□□□ -1.59
TcraP01849 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm5154-201ENSMUST00000203971 399 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm4259-201ENSMUST00000206489 758 ntBASIC5.12□□□□□ -1.59
TcraP01849 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
TcraP01849 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC5.12□□□□□ -1.59
TcraP01849 AC154307.1-201ENSMUST00000214799 90 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm4977-201ENSMUST00000215709 1262 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm18378-201ENSMUST00000216245 628 ntBASIC5.12□□□□□ -1.59
TcraP01849 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.12□□□□□ -1.59
TcraP01849 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm5668-201ENSMUST00000220897 436 ntBASIC5.12□□□□□ -1.59
TcraP01849 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC5.12□□□□□ -1.59
TcraP01849 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 Gm5564-201ENSMUST00000034916 967 ntBASIC5.12□□□□□ -1.59
TcraP01849 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC5.12□□□□□ -1.59
TcraP01849 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 Gm24143-201ENSMUST00000082633 145 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TcraP01849 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TcraP01849 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.12□□□□□ -1.59
TcraP01849 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.12□□□□□ -1.59
TcraP01849 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.12□□□□□ -1.59
TcraP01849 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TcraP01849 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TcraP01849 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TcraP01849 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TcraP01849 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.11□□□□□ -1.59
TcraP01849 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TcraP01849 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm43023-201ENSMUST00000197583 2106 ntBASIC5.11□□□□□ -1.59
TcraP01849 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.11□□□□□ -1.59
TcraP01849 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 Mir704-201ENSMUST00000102106 77 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm24071-201ENSMUST00000104520 132 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm10936-201ENSMUST00000105264 252 ntBASIC5.11□□□□□ -1.59
TcraP01849 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm11969-201ENSMUST00000118848 356 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm15753-201ENSMUST00000119241 1062 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm11901-201ENSMUST00000120412 437 ntBASIC5.11□□□□□ -1.59
TcraP01849 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm25320-201ENSMUST00000122551 324 ntBASIC5.11□□□□□ -1.59
TcraP01849 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC5.11□□□□□ -1.59
TcraP01849 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm22214-201ENSMUST00000157563 172 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm24347-201ENSMUST00000158711 142 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC5.11□□□□□ -1.59
TcraP01849 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC5.11□□□□□ -1.59
TcraP01849 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.11□□□□□ -1.59
TcraP01849 Gm22569-201ENSMUST00000175545 124 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm15251-201ENSMUST00000177947 883 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm24307-201ENSMUST00000178512 101 ntBASIC5.11□□□□□ -1.59
TcraP01849 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TcraP01849 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TcraP01849 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TcraP01849 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms