Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm14891-201ENSMUST00000117378 596 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm5255-201ENSMUST00000120125 642 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm5843-201ENSMUST00000121631 476 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm3760-201ENSMUST00000167475 804 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm3585-201ENSMUST00000173438 875 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm5272-201ENSMUST00000182730 982 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm27156-201ENSMUST00000184589 754 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm30517-201ENSMUST00000197350 772 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm43926-201ENSMUST00000203978 430 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm8168-201ENSMUST00000209631 948 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm45497-201ENSMUST00000211701 740 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.22□□□□□ -1.41
Nkx3-1P97436 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Nkx3-1P97436 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.21□□□□□ -1.41
Nkx3-1P97436 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.21□□□□□ -1.41
Nkx3-1P97436 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.21□□□□□ -1.41
Nkx3-1P97436 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Nkx3-1P97436 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm25498-201ENSMUST00000104424 129 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm6987-201ENSMUST00000119319 428 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm13940-201ENSMUST00000121023 301 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm11257-201ENSMUST00000121313 315 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm2709-201ENSMUST00000142979 350 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm26357-201ENSMUST00000158218 115 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Mir7033-201ENSMUST00000184259 81 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm29605-201ENSMUST00000190800 292 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm7285-201ENSMUST00000198801 580 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm43235-201ENSMUST00000200121 297 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm44227-201ENSMUST00000203576 241 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm18690-201ENSMUST00000204488 985 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm2754-201ENSMUST00000223383 589 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.21□□□□□ -1.42
Nkx3-1P97436 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx3-1P97436 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms