Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm25332-201ENSMUST00000158038 105 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm23007-201ENSMUST00000158951 177 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm22408-201ENSMUST00000174925 65 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm4891-201ENSMUST00000182279 912 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm37741-201ENSMUST00000191768 1256 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm43542-201ENSMUST00000199505 379 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm18192-201ENSMUST00000210174 941 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.21□□□□□ -1.09
Hmgb1P63158 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.21□□□□□ -1.09
Hmgb1P63158 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Hmgb1P63158 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm13915-201ENSMUST00000119314 931 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm24307-201ENSMUST00000178512 101 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm5445-201ENSMUST00000180224 480 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm43555-201ENSMUST00000196588 310 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm40853-201ENSMUST00000221342 582 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm9255-201ENSMUST00000223225 581 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 AC151902.1-201ENSMUST00000227800 375 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm6195-201ENSMUST00000063059 357 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr888-201ENSMUST00000075228 945 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm4973-201ENSMUST00000206925 1334 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC8.21□□□□□ -1.1
Hmgb1P63158 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmgb1P63158 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
Hmgb1P63158 Gm37076-201ENSMUST00000192033 2294 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 215.8 ms