Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm16123-201ENSMUST00000118647 1517 ntBASIC9.34□□□□□ -0.91
Col18a1P39061 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC9.34□□□□□ -0.91
Col18a1P39061 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC9.34□□□□□ -0.91
Col18a1P39061 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC9.34□□□□□ -0.91
Col18a1P39061 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.34□□□□□ -0.91
Col18a1P39061 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col18a1P39061 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col18a1P39061 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col18a1P39061 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col18a1P39061 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC9.33□□□□□ -0.92
Col18a1P39061 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm22372-201ENSMUST00000104589 136 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm14938-201ENSMUST00000119482 943 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Gm14126-201ENSMUST00000122345 395 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Gm25722-201ENSMUST00000157498 279 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Gm20491-201ENSMUST00000173765 1241 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC9.33□□□□□ -0.92
Col18a1P39061 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Gm43383-201ENSMUST00000195981 469 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Mir6906-201ENSMUST00000198998 58 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm3266-201ENSMUST00000217832 591 ntBASIC9.33□□□□□ -0.92
Col18a1P39061 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col18a1P39061 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col18a1P39061 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC9.33□□□□□ -0.92
Col18a1P39061 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col18a1P39061 Gm14667-201ENSMUST00000119448 1350 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Col18a1P39061 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Col18a1P39061 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm12643-201ENSMUST00000116078 374 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm12262-201ENSMUST00000119915 305 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm11504-201ENSMUST00000120211 173 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm12618-201ENSMUST00000121754 483 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm16248-201ENSMUST00000124238 243 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm37604-201ENSMUST00000191749 1272 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm37322-201ENSMUST00000193409 337 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm42619-201ENSMUST00000197564 1136 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm45610-201ENSMUST00000209227 784 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 AC124516.2-201ENSMUST00000221455 1829 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm15074-201ENSMUST00000117603 936 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm14614-201ENSMUST00000119873 384 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm13991-201ENSMUST00000120190 648 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Gm27152-201ENSMUST00000183828 99 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms