Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Gm14836-201ENSMUST00000118567 471 ntBASIC7.71□□□□□ -1.18
NcanP55066 Gm14070-201ENSMUST00000120773 428 ntBASIC7.71□□□□□ -1.18
NcanP55066 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Gm16139-201ENSMUST00000160015 420 ntBASIC7.71□□□□□ -1.18
NcanP55066 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.71□□□□□ -1.18
NcanP55066 Gm23968-201ENSMUST00000175047 125 ntBASIC7.71□□□□□ -1.18
NcanP55066 Gm36965-201ENSMUST00000193797 394 ntBASIC7.71□□□□□ -1.18
NcanP55066 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.71□□□□□ -1.18
NcanP55066 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.71□□□□□ -1.18
NcanP55066 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.71□□□□□ -1.18
NcanP55066 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.71□□□□□ -1.18
NcanP55066 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
NcanP55066 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.7□□□□□ -1.18
NcanP55066 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.7□□□□□ -1.18
NcanP55066 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NcanP55066 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Gm14729-201ENSMUST00000118373 689 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm15181-201ENSMUST00000120142 177 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm11879-201ENSMUST00000121885 702 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC7.7□□□□□ -1.18
NcanP55066 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Gm23539-201ENSMUST00000157537 224 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm26410-201ENSMUST00000157670 261 ntBASIC7.7□□□□□ -1.18
NcanP55066 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm4956-202ENSMUST00000178869 672 ntBASIC7.7□□□□□ -1.18
NcanP55066 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.7□□□□□ -1.18
NcanP55066 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm5694-201ENSMUST00000195648 641 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.7□□□□□ -1.18
NcanP55066 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.7□□□□□ -1.18
NcanP55066 Gm44795-201ENSMUST00000205496 319 ntBASIC7.7□□□□□ -1.18
NcanP55066 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
NcanP55066 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.7□□□□□ -1.18
NcanP55066 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
NcanP55066 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NcanP55066 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NcanP55066 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
NcanP55066 Gm3822-201ENSMUST00000201941 2935 ntBASIC7.7□□□□□ -1.18
NcanP55066 Gm37960-201ENSMUST00000192402 1897 ntBASIC7.7□□□□□ -1.18
NcanP55066 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NcanP55066 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NcanP55066 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.69□□□□□ -1.18
NcanP55066 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NcanP55066 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.69□□□□□ -1.18
NcanP55066 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NcanP55066 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms